ausgewählte Veröffentlichungen

• Abschnitt eines Buches

  • Cellular Potts Models for Interacting Cell Populations: Mathematical Foundation, Challenges, and Future Prospects 2018
  • Multi-Scale Analysis of Contact-Dependent Interaction in Tissue Aggregation and Invasion 2015

• Artikel

  • Modeling age-specific incidence of colon cancer via niche competition.  PLoS computational biology, Vol.18(8), 1010403.  2022
  • Plasticity within Aldehyde Dehydrogenase-Positive Cells Determines Prostate Cancer Radiosensitivity.  Molecular cancer research, Vol.20(5), pp. 794-809.  2022
  • Model-Based Prediction of an Effective Adhesion Parameter Guiding Multi-Type Cell Segregation.  Entropy (Basel, Switzerland), Vol.23(11), p. 1378.  2021
  • Patterns of Tumor Progression Predict Small and Tissue-Specific Tumor-Originating Niches.  Frontiers in oncology, Vol.8, pp. 668-668.  2019
  • Cell adhesion heterogeneity reinforces tumour cell dissemination: novel insights from a mathematical model.  Biology direct, Vol.12(1), pp. 18-18.  2017
  • On the statistical power of Baarda's outlier test and some alternative..  Journal of geodetic science., Vol.7(1), pp. 68-78.  2017
  • A dynamically diluted alignment model reveals the impact of cell turnover on the plasticity of tissue polarity patterns.  Journal of the Royal Society interface, Vol.14(135), pp. 20170466-20170466.  2017
  • CellTrans: An R Package to Quantify Stochastic Cell State Transitions.  Bioinformatics and biology insights, Vol.11(11), pp. 1177932217712241-1177932217712241.  2017
  • Model-Based Evaluation of Spontaneous Tumor Regression in Pilocytic Astrocytoma.  PLoS computational biology, Vol.11(12), pp. e1004662-e1004662.  2015
  • An Emerging Allee Effect Is Critical for Tumor Initiation and Persistence.  PLoS computational biology, Vol.11(9), pp. e1004366-e1004366.  2015
  • Analysis of Individual Cell Trajectories in Lattice-Gas Cellular Automaton Models for Migrating Cell Populations.  Bulletin of mathematical biology, Vol.77(4), pp. 660-697.  2015
  • How Does a Single Cell Know When the Liver Has Reached Its Correct Size?.  PloS one, Vol.9(4), pp. e93207-e93207.  2014
  • Multi-scale modeling in morphogenesis: a critical analysis of the cellular Potts model.  PloS one, Vol.7(9), pp. e42852-e42852.  2012
  • Amoeboid-mesenchymal migration plasticity promotes invasion only in complex heterogeneous microenvironments.  Scientific reports, Vol.7(1), pp. 9237-12. 
  • Efficient Radial-Shell Model for 3D Tumor Spheroid Dynamics with Radiotherapy.  Cancers, Vol.15(23), p. 5645. 
  • Is cell segregation like oil and water: asymptotic versus transitory regime.  PLoS computational biology, Vol.18(9), 1010460. 
  • Minimal cellular automaton model with heterogeneous cell sizes predicts epithelial colony growth.  Journal of theoretical biology, p. 111882. 
  • Modeling collective cell motion: Are on- and off-lattice models equivalent?.  Philosophical Transactions of the Royal Society B, Vol.375(1807), pp. 1-8. 
  • Stem cell-associated heterogeneity in Glioblastoma results from intrinsic tumor plasticity shaped by the microenvironment.  Nature communications, Vol.10(1), pp. 1787-1787. 
  • Vectorial active matter on the lattice: polar condensates and nematic filaments.  New Journal of Physics, Vol.25(12), pp. 1367-2630. 

• Datensatz

  • Supporting data for "Image segmentation of treated and untreated tumor spheroids by Fully Convolutional Networks" 2025

• Dokument

  • Minimal cellular automaton model with heterogeneous cell sizes predicts epithelial colony growth.  arXiv.org. 2024
  • Image segmentation of treated and untreated tumor spheroids by Fully Convolutional Networks 2024
  • Emerging Allee effect in tumor growth 2014

• Konferenz-Poster

  • A Dynamically Diluted Alignment Model Reveals the Impact of Cell Turnover on the Plasticity of Tissue Polarity Patterns
  • Analyzing the impact of cell turnover on the plasticity of tissue polarity patterns by cellular automaton modeling: The dynamically diluted alignment model
  • CellTrans: An R Package to Quantify Stochastic Cell State Transitions
  • Dimension reduction in simulation models for the analysis of 3D spheroids for the optimization of radiotherapy in tumor treatment
  • Image segmentation of irradiated tumour spheroids by Fully
  • Image segmentation of irradiated tumour spheroids by Fully Convolutional Networks
  • Is cell segregation like oil and water: asymptotic versus transitory regime
  • Is cell segregation like oil and water: asymptotic versus transitory regime
  • Model-Based Prediction of an Effective Adhesion Parameter Guiding Multi-Type Cell Segregation
  • Model-Based Prediction of an Effective Adhesion Parameter Guiding Multi-Type Cell Segregation
  • Model-based prediction of an effective adhesion parameter guiding multi-type cell segregation
  • Modeling age-specific incidence of colon cancer via niche competition
  • Pancreatic cancer cell spheroid control probability assay (SCP) to assess the outcome of single-dose versus clinical-practice fractionated proton irradiation
  • Patterns of Tumor Progression Predict Small and Tissue-Specific Tumor-Originating Niches